Select algorithm(s) to use
How to contribute new algorithm?
  Select our 3 preferred algorithms
  Select all algorithms   Clear selected algorithms
  BioHMM     what is BioHMM?
Use clone distances
  Circular Binary Segmentation:    
Alpha   ( min >0  max <1)
  Forward-Backward Fragment-Annealing Segmentation    
Sig   ( min >0  max <1) Delta   ( min >0  max 0.5)
Smooth range ( min 10  max 100) Fine tune
  Fused Lasso(cghFLasso)   
FDR   ( min >0  max <1) Use this value
Recalculate Segment Means   
  Gaussian Model with Adaptive Penalty (Picard et al.)   
Km ( min 5   max 50)   S  ( min -1  max <0)
 GLAD   
Qlambda ( min 0.9  max 0.9999)
  Locally weighted scatterplot smoother   
Width ( min 5   max 50)
  Wavelet smoothing  
Levels ( min 1   max 5 )
Quantile Smoothing  
Lambda   ( min >0  max<10 )
  Running Average  
Width   ( min 5   max 50)
Specify plotting parameters  
Minimum Log-Ratio   ( min -10  max -1) Maximum Log-Ratio ( min 1  max 10)
Specify threshold to call gains and losses  
Threshold   ( min 0.01  max 0.5)
Email Address [required]
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Data File
  Upload your data file Upload example data file
WARNING: please do not submit more than one job at a time. Excessive job submissions may be terminated.