Supplementary Information (Cortes-Ciriano et al, 2018)
Supplementary Data File 1
High-confidence chromothripsis calls
Supplementary Data File 2
Low-confidence chromothripsis calls
Supplementary Data File 3
Regions displaying CN oscillations not classified as chromothripsis. These include: (i) CN oscillating profiles characterized by clusters of tandem duplications or deletions, (ii) candidate chromothripsis cases satisfying the statistical criteria but considered false positives by visual inspection, and (iii) chromosomes displaying at least 7 CN oscillations with few or no SVs mapped
Supplementary Data File 4
Large clusters of interleaved SVs (at least 20) not identified as chromothripsis by our method
Supplementary Table 1
Information and values for the statistical criteria for all tumors considered
ShatterSeek code
To detect chromothripsis we developed the R package ShatterSeek, which is publicly available at github